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RAG, Fine-Tuning, or Both? Optimizing Enterprise AI for Accuracy and Cost

29-custom-ai-enterprise

Date

November 5, 2025

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Key takeaways

For enterprises to unlock real value from AI, models need to produce accurate responses based on specific company data. Whether it’s a chatbot that answers customer questions about a retailer’s return policy or helps a financial institution’s customers understand available loan options, it’s crucial that the LLM gets the answer right.

Achieving this level of LLM customization typically involves two techniques: RAG (Retrieval Augmented Generation) and fine-tuning. Each technique has its strengths and challenges in cost, time, data requirements, and performance. Depending on your use case, you may find that one—or a combination of the two—is more effective.

In this post, we’ll unpack the differences between RAG and fine-tuning and explore how enterprises can overcome the cost and complexity of AI customization to drive real business transformation.

Comparing RAG and fine-tuning

An overview of RAG

Some businesses choose to solely use RAG rather than fine-tuning a model. With RAG, pre-trained models fetch or ‘retrieve’ data at runtime from supplied documentation to inform accurate responses.

Benefits of RAG

Many believe that RAG is the only solution for producing specific, accurate answers. However, the RAG technique alone can present significant limitations in cost, speed, and flexibility that make it an incomplete solution for most enterprise use cases.

Costs of RAG

There are several long-term costs associated with using RAG in enterprise applications, including:

Other limitations of RAG

Fine-tuning

Fine-tuning, done correctly, can provide production-grade accuracy in enterprise applications by training a base model on domain-specific data. It requires the collection and processing of new datasets to train the model and enhance its knowledge in a specific area.

Benefits of fine-tuning for enterprise applications:

The catch: customizing an LLM on your own data is no small feat. The traditional fine-tuning process presents major challenges in cost, time, and infrastructure.

Challenges in traditional fine-tuning

Should you combine fine-tuning and RAG?

Depending on your use case, the best path to AI value may be to customize LLMs with a combination of RAG and fine-tuning. Fine-tuning creates a specialized LLM that better understands the specific task while RAG ensures that responses are accurate and up to date based on the latest documentation.

Let’s compare the LLM to a medical doctor. Doctors study for years in medical school to become experts on the topic of medicine. This level of training is required for them to be considered qualified to perform their job. In their practice, they also need access to up-to-date medical research and disease references to accurately diagnose and treat their patients.

Fine-tuning is like medical school. It creates faster, more knowledgeable LLMs that can adapt to a wider range of industry-specific needs. Combining the fine-tuning process with the RAG approach gives your LLM access to the latest information for more accurate and reliable answers.

Taking a hybrid approach: Reducing token costs by 60% with SeekrFlow

Whether you choose RAG, fine-tuning, or a combination, the massive data and infrastructure requirements of building custom AI can quickly decrease the value of its implementation. Overcoming these challenges requires tackling your data problem from the start.

That’s where Seekr can help. Our end-to-end AI development platform, SeekrFlow, helps you accelerate your fine-tuning process and reduce the downstream costs of RAG by handling data alignment and preparation for you.

SeekrFlow AI-Ready Data Engine How it works diagram

Data preparation typically involves gathering, labeling, normalizing and formatting data—a time and resource intensive process. It also relies on humans to catch and label mistakes, which can lead to unpredictable or biased outcomes.

With SeekrFlow’s autonomous data creation workflow, you can align a generalist model to the high-level industry principles, values, or regulations of a specific domain with minimal human intervention. The result is a fine-tuned specialist model that adheres to these principles and boosts the effectiveness of RAG at runtime.

This unique approach streamlines the model customization process so businesses can realize the true value of AI faster.

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